PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe3G334900.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family bHLH
Protein Properties Length: 240aa    MW: 26793.5 Da    PI: 8.0426
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe3G334900.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH12.50.000283987254
                       HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                HLH  2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                       +  + erE+  Rd +N+ f eL   l ++     + + Ka+iL  A++ +++L
  Aqcoe3G334900.1.p 39 KIHKAEREKLKRDYLNELFLELDHALEPN----RQNNGKASILGDATRLLREL 87
                       567889********************997....57899999****99998877 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088810.4363787IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.31E-1038103IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.0E-738106IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010106Biological Processcellular response to iron ion starvation
GO:0055072Biological Processiron ion homeostasis
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 240 aa     Download sequence    Send to blast
MVSEISTQLV NDVNVGADKL IGHGRSFSNK KKHVKVPKKI HKAEREKLKR DYLNELFLEL  60
DHALEPNRQN NGKASILGDA TRLLRELLSQ VETLKRENAA LVSESHYVTV EKNELKDENA  120
VLEAQIEELH TQLKEKSPND LTWNPATTKS QIANLTSSLF QDPLKLPVAD PTLQAPPVVG  180
PVLVIPLHHD FQALPQPETA QVPLKAPSNV KRPHARYPTP SDSWPSHLLG EQPKRTDEK*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010257049.11e-86PREDICTED: transcription factor bHLH47-like
RefseqXP_010257057.11e-86PREDICTED: transcription factor bHLH47-like
RefseqXP_010257065.11e-86PREDICTED: transcription factor bHLH47-like
TrEMBLA0A061FX231e-65A0A061FX23_THECC; Basic helix-loop-helix DNA-binding superfamily protein, putative isoform 1
STRINGVIT_14s0108g00480.t016e-64(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G47640.34e-37bHLH family protein